Class jalview.io.BioJsHTMLOutputTest
|
100%
successful |
Tests
| Test | Duration | Result |
|---|---|---|
| expectedNullPointerException | 0s | passed |
| getBioJsMSAVersions | 0.001s | passed |
| getJalviewAlignmentAsJsonString | 3.050s | passed |
Standard output
Number of discovered versions : 3 version : 0.1.0 File : /home/thomas/.biojs_templates/BioJsMSA_0.1.0.txt version : 0.1.1 File : /home/thomas/.biojs_templates/Latest_BioJsMSA_0.1.1.txt version : 0.2.0 File : /home/thomas/.biojs_templates/BioJsMSA_0.2.0.txt Current latest version : /home/thomas/.biojs_templates/Latest_BioJsMSA_0.1.1.txt Attempting to connect with ClustalOWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@4639e015 Attempting to connect with TcoffeeWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@36b33ce5 Attempting to connect with ProbconsWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@1b17845e Attempting to connect with MSAprobsWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@3622ce9 Attempting to connect with GLprobsWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@720bfbcf Attempting to connect with AAConWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@1491b236 Attempting to connect with RNAalifoldWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@600b7deb Attempting to connect with JronnWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@7015a86f Attempting to connect with DisemblWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@32fe9557 Attempting to connect with GlobPlotWS... Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@363e76d4
Standard error
Jul 02, 2023 10:12:07 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:08 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:08 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:08 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:09 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:09 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:09 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:10 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! DEBUG - Scanning news items: newsnew=false and lastDate is Fri Jun 30 20:04:22 CEST 2023 DEBUG - Saved last read date as 30 Jun 2023, 20:04:22 DEBUG - Scanning news items: newsnew=false and lastDate is Fri Jun 30 20:04:22 CEST 2023 DEBUG - Saved last read date as 30 Jun 2023, 20:04:22 DEBUG - Scanning news items: newsnew=false and lastDate is Fri Jun 30 20:04:22 CEST 2023 DEBUG - Saved last read date as 30 Jun 2023, 20:04:22 Jul 02, 2023 10:12:10 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully! Jul 02, 2023 10:12:10 AM compbio.ws.client.Jws2Client connect INFO: Connected successfully!